Basic Information
Locus ID:
gene:TRIDC4BG044330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 525788674 | 525791106 | + | gene:TRIDC4BG044330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 61,994.97 Da | 43.84 | 81.03 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 188 | 444 | 3.2E-87 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 19 | 109 | 2.1E-10 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 10 | 110 | 7.53E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 126 | 2.3E-15 | IPR011333 |
| SMART | SM00225 | BTB_4 | 25 | 121 | 1.7E-5 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 188 | 468 | 86.057556 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 25 | 93 | 11.93656 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 523 | - | - |
| Coils | Coil | Coil | 505 | 525 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67385.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037425923.1 | BTB/POZ domain-containing protein SR1IP1-like [Triticum dicoccoides] | 0 |
| Q66GP0 | BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana OX=3702 GN=SR1IP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6IWH8 | BTB/POZ domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG044330.