Basic Information
Locus ID:
gene:TRIDC4BG044160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 524853953 | 524859745 | + | gene:TRIDC4BG044160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 69,727.73 Da | 40.93 | 80.70 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 122 | 148 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 75 | 104 | 0.011 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 76 | 417 | 1.01E-38 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 74 | 347 | 3.9E-29 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 348 | 429 | 3.3E-5 | IPR015943 |
| SMART | SM00320 | WD40_4 | 67 | 104 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 256 | 296 | 0.54 | IPR001680 |
| SMART | SM00320 | WD40_4 | 379 | 418 | 0.11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 107 | 148 | 0.0085 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 123 | 157 | 10.541869 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 135 | 149 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 558 | 581 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 604 | 624 | - | - |
| Coils | Coil | Coil | 309 | 329 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21060.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037425910.1 | protein RBL-like isoform X1 [Triticum dicoccoides] | 0 |
| Q5E915 | Protein RBL OS=Arabidopsis thaliana OX=3702 GN=RBL PE=1 SV=1 | 0 | |
| TrEMBL | A0A453IQ03 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG044160.