Basic Information
Locus ID:
gene:TRIDC4BG043720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 522531330 | 522532344 | - | gene:TRIDC4BG043720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 27,107.24 Da | 48.59 | 93.46 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 30 | 82 | 3.8E-7 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 25 | 87 | 4.12E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 19 | 123 | 3.8E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 30 | 85 | 10.158304 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 49 | 58 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 145 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037425876.1 | uncharacterized protein LOC119291251 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6IVN0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG043720.