Basic Information
Locus ID:
gene:TRIDC4BG038330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 461878742 | 461881108 | + | gene:TRIDC4BG038330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 78,452.84 Da | 42.42 | 79.41 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 339 | 419 | 2.53805E-25 | - |
| CDD | cd00028 | B_lectin | 31 | 157 | 5.50134E-34 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 72 | 183 | 5.2E-33 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 344 | 400 | 9.1E-16 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 217 | 323 | 1.4E-27 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 490 | 651 | 6.5E-31 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 59 | 221 | 2.09E-24 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 702 | 3.1E-53 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 651 | 714 | 2.7E-5 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 19 | 155 | 5.5E-22 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 564 | 650 | 1.9E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 460 | 563 | 1.5E-28 | - |
| SMART | SM00108 | blect_4 | 30 | 157 | 5.5E-40 | IPR001480 |
| SMART | SM00220 | serkin_6 | 487 | 702 | 1.5E-12 | IPR000719 |
| SMART | SM00473 | ntp_6 | 345 | 418 | 8.4E-11 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 651 | 727 | 3.3E-15 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 1 | 653 | 6.7E-202 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 151 | 19.857422 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 728 | 26.379004 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 341 | 419 | 10.448967 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 493 | 517 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 608 | 620 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037428017.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum dicoccoides] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IV36 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG038330.