Basic Information
Locus ID:
gene:TRIDC4BG037160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 448540838 | 448543376 | + | gene:TRIDC4BG037160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 48,508.43 Da | 61.67 | 80.70 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13637 | Ankyrin repeats (many copies) | 161 | 215 | 2.5E-6 | - |
| Pfam | PF13637 | Ankyrin repeats (many copies) | 82 | 132 | 7.8E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 315 | 376 | 1.36E-6 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 19 | 251 | 1.44E-49 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 147 | 311 | 6.3E-26 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 10 | 146 | 3.0E-28 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 312 | 382 | 1.8E-6 | IPR013083 |
| SMART | SM00248 | ANK_2a | 195 | 224 | 0.039 | IPR002110 |
| SMART | SM00248 | ANK_2a | 228 | 257 | 3500.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 113 | 142 | 0.001 | IPR002110 |
| SMART | SM00248 | ANK_2a | 158 | 187 | 0.13 | IPR002110 |
| SMART | SM00248 | ANK_2a | 79 | 108 | 3.7E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 46 | 75 | 0.016 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 195 | 221 | 11.983458 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 79 | 111 | 11.24708 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 323 | 372 | 9.74522 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 158 | 190 | 12.15522 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 79 | 106 | 10.09973 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 195 | 227 | 13.03665 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 158 | 183 | 11.160984 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 46 | 78 | 8.86989 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 174 | 188 | 4.6E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 114 | 129 | 4.6E-5 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 454 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28840.1 | XB3 ortholog 1 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_037425374.1 | E3 ubiquitin-protein ligase XB3-like isoform X1 [Triticum dicoccoides] | 0 |
| Q65XV2 | E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica OX=39947 GN=XB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453IDZ2 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG037160.