Basic Information
Locus ID:
gene:TRIDC4BG036550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc-finger of nitric oxide synthase-interacting protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 440441270 | 440443418 | - | gene:TRIDC4BG036550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 40,788.38 Da | 61.13 | 63.05 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04641 | Rtf2 RING-finger | 250 | 345 | 5.4E-8 | - |
| Pfam | PF15906 | Zinc-finger of nitric oxide synthase-interacting protein | 68 | 138 | 1.0E-15 | IPR031790 |
| SUPERFAMILY | SSF57850 | RING/U-box | 273 | 328 | 6.48E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 88 | 139 | 2.59E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 194 | 1.9E-8 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 238 | 347 | 1.1E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 277 | 318 | 0.013 | IPR001841 |
| SMART | SM00184 | ring_2 | 106 | 136 | 3.3 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 277 | 319 | 10.261575 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| Coils | Coil | Coil | 138 | 158 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61620.1 | phosphoinositide binding. | 0 |
| RefSeq | XP_037425335.1 | E3 ubiquitin-protein ligase CSU1-like [Triticum dicoccoides] | 0 |
| Q9SY88 | E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana OX=3702 GN=CSU1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453ID09 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG036550.