Basic Information
Locus ID:
gene:TRIDC4BG035530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 431586109 | 431589709 | - | gene:TRIDC4BG035530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 53,237.19 Da | 46.91 | 73.43 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 302 | 340 | 1.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 346 | 382 | 2.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 50 | 84 | 3.7E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 44 | 382 | 6.16E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 44 | 386 | 2.6E-49 | IPR015943 |
| SMART | SM00320 | WD40_4 | 179 | 224 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 299 | 341 | 0.039 | IPR001680 |
| SMART | SM00320 | WD40_4 | 137 | 174 | 4.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 45 | 84 | 8.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 242 | 280 | 28.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 344 | 383 | 4.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 87 | 129 | 15.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 351 | 392 | 10.475033 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 52 | 84 | 12.815584 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 52 | 84 | 15.554599 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45620.1 | Transducin/WD40 repeat-like superfamily protein. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | 0 |
| RefSeq | XP_037425255.1 | DDB1- and CUL4-associated factor 8-like [Triticum dicoccoides] | 0 |
| Q6NRH1 | DDB1- and CUL4-associated factor 8 OS=Xenopus laevis OX=8355 GN=dcaf8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ITP3 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG035530.