Basic Information
Locus ID:
gene:TRIDC4BG034640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 422917444 | 422921957 | + | gene:TRIDC4BG034640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 111,899.63 Da | 39.89 | 97.85 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 757 | 1028 | 2.86989E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 83 | 124 | 5.3E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 309 | 331 | 0.47 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 756 | 954 | 5.1E-25 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 15 | 61 | 5.8E-5 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 285 | 300 | 0.92 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 448 | 560 | 3.4E-21 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 210 | 456 | 4.42E-34 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 282 | 4.08E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 755 | 1030 | 5.33E-41 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 14 | 203 | 4.6E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 204 | 577 | 7.0E-77 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 739 | 828 | 5.4E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 830 | 1037 | 1.5E-32 | - |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 158 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 511 | 535 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 110 | 7.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 159 | 182 | 85.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 751 | 1033 | 25.205881 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 645 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27060.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037425199.1 | probable inactive receptor kinase At5g10020 [Triticum dicoccoides] | 0 |
| Q0WR59 | Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana OX=3702 GN=At5g10020 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6IPN8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG034640.