Basic Information
Locus ID:
gene:TRIDC4BG033530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 407420761 | 407427582 | + | gene:TRIDC4BG033530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 92,585.88 Da | 37.45 | 79.96 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 239 | 778 | 0.0 | - |
| Pfam | PF00899 | ThiF family | 220 | 722 | 1.5E-72 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 69 | 138 | 4.7E-20 | IPR032420 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 407 | 660 | 5.1E-85 | IPR019572 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 1 | 67 | 1.0E-23 | IPR032418 |
| Pfam | PF09358 | Ubiquitin fold domain | 731 | 820 | 8.4E-23 | IPR018965 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 1 | 205 | 4.19E-37 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 215 | 715 | 1.44E-126 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 733 | 823 | 3.0E-21 | IPR038252 |
| Gene3D | G3DSA:3.40.50.720 | - | 240 | 719 | 9.8E-193 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 1 | 66 | 2.5E-81 | IPR042302 |
| Gene3D | G3DSA:1.10.10.2660 | - | 392 | 667 | 9.8E-193 | IPR042063 |
| Gene3D | G3DSA:3.40.50.12550 | - | 67 | 230 | 2.5E-81 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 698 | 820 | 3.9E-47 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 1 | 825 | 0.0 | IPR018075 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 182 | 190 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 399 | 407 | - | IPR033127 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_037430705.1 | ubiquitin-activating enzyme E1 3-like isoform X1 [Triticum dicoccoides] | 0 |
| P31252 | Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum OX=4565 GN=UBA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IRQ2 | E1 ubiquitin-activating enzyme OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG033530.