Basic Information
Locus ID:
gene:TRIDC4BG033040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 404715287 | 404718152 | - | gene:TRIDC4BG033040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 86,603.99 Da | 33.28 | 98.06 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 518 | 787 | 5.88716E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 168 | 226 | 1.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 51 | 91 | 1.8E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 515 | 784 | 5.1E-38 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 99 | 376 | 4.08E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 516 | 789 | 4.78E-61 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 305 | 1.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 391 | 1.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 205 | 1.1E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 590 | 794 | 5.7E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 518 | 589 | 4.6E-18 | - |
| SMART | SM00369 | LRR_typ_2 | 237 | 260 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 236 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 309 | 333 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 261 | 285 | 31.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 512 | 791 | 34.46365 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 261 | 274 | 3.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 168 | 181 | 3.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 796 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 487 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51740.1 | inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. | 0 |
| RefSeq | XP_037430676.1 | probable leucine-rich repeat receptor-like protein kinase IMK3 [Triticum dicoccoides] | 0 |
| C0LGP9 | Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IRL8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG033040.