halophFGD

Basic Information

Locus ID: gene:TRIDC4BG032630

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Short Name: APC11

Description: Anaphase-promoting complex subunit 11 RING-H2 finger

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
4B	399756151	399760097	-	gene:TRIDC4BG032630

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.92	14,087.13 Da	39.38	64.75	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd16456	RING-H2_APC11	58	120	5.30223E-40	IPR024991
Pfam	PF12861	Anaphase-promoting complex subunit 11 RING-H2 finger	39	121	2.3E-41	IPR024991
SUPERFAMILY	SSF57850	RING/U-box	39	121	3.53E-33	-
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	30	122	4.3E-29	IPR013083
ProSiteProfiles	PS50089	Zinc finger RING-type profile.	72	115	10.836942	IPR001841

Gene Ontology

Biological Process:

GO:0031145 (anaphase-promoting complex-dependent catabolic process)

Molecular Function:

Cellular Component:

GO:0005680 (anaphase-promoting complex)

KEGG Pathway

KO Term:

K03358 (anaphase-promoting complex subunit 11)

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G05870.1	anaphase-promoting complex/cyclosome 11. Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.
RefSeq	XP_048571295.1	anaphase-promoting complex subunit 11-like isoform X1 [Triticum urartu]
Swiss-Prot	Q9M9L0	Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=3
TrEMBL	A0A8I6XME1	Anaphase-promoting complex subunit 11 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4BG032630.