Basic Information
Locus ID:
gene:TRIDC4BG030840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 378578101 | 378581194 | - | gene:TRIDC4BG030840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 94,736.22 Da | 42.42 | 103.05 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 615 | 881 | 5.13514E-88 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 329 | 347 | 1.2 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 611 | 878 | 1.4E-41 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 137 | 157 | 1.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 67 | 124 | 4.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 187 | 243 | 8.9E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 399 | 458 | 2.9E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 162 | 182 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 613 | 878 | 5.13E-67 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 4 | 293 | 2.51E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 282 | 486 | 3.3E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 599 | 685 | 2.6E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 373 | 5.9E-110 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 374 | 493 | 1.9E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 686 | 890 | 3.4E-49 | - |
| SMART | SM00369 | LRR_typ_2 | 445 | 469 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 231 | 255 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 39 | 63 | 5.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 230 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 15 | 38 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 159 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 350 | 374 | 24.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 609 | 881 | 35.509567 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 615 | 638 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 421 | 434 | 2.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 400 | 413 | 2.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56370.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037430521.1 | probable LRR receptor-like serine/threonine-protein kinase IRK [Triticum dicoccoides] | 0 |
| Q9LY03 | Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana OX=3702 GN=IRK PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ISN9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG030840.