Basic Information
Locus ID:
gene:TRIDC4BG030200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 367305464 | 367309335 | + | gene:TRIDC4BG030200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 56,156.36 Da | 49.14 | 88.55 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 159 | 206 | 8.2E-6 | IPR001810 |
| Pfam | PF01167 | Tub family | 223 | 504 | 1.0E-107 | IPR000007 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 209 | 509 | 1.54E-96 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 153 | 202 | 2.62E-5 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 153 | 206 | 1.4E-5 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 220 | 503 | 1.9E-93 | IPR025659 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 439 | 452 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 439 | 455 | 6.1E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 275 | 291 | 6.1E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 421 | 438 | 6.1E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 291 | 315 | 6.1E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 487 | 509 | 6.1E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 466 | 485 | 6.1E-75 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 340 | 367 | 6.1E-75 | IPR000007 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47900.3 | tubby like protein 3. Member of TLP family | 0 |
| RefSeq | XP_037430474.1 | tubby-like F-box protein 6 [Triticum dicoccoides] | 0 |
| Q10LG8 | Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ISJ4 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG030200.