Basic Information
Locus ID:
gene:TRIDC4BG029180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ulp1 protease family, C-terminal catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 343468509 | 343480572 | + | gene:TRIDC4BG029180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 47,974.57 Da | 49.05 | 81.93 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 222 | 403 | 1.5E-40 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 174 | 407 | 2.13E-65 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 174 | 407 | 6.0E-72 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 207 | 379 | 27.598488 | IPR003653 |
| Coils | Coil | Coil | 142 | 162 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15880.1 | Cysteine proteinases superfamily protein. EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. | 0 |
| RefSeq | XP_037430414.1 | ubiquitin-like-specific protease ESD4 isoform X1 [Triticum dicoccoides] | 0 |
| Q94F30 | Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana OX=3702 GN=ESD4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IST0 | ULP_PROTEASE domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG029180.