Basic Information
Locus ID:
gene:TRIDC4BG025860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 251418885 | 251428134 | + | gene:TRIDC4BG025860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 44,675.37 Da | 54.13 | 88.21 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 181 | 203 | 0.027 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 115 | 385 | 2.14E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 32 | 385 | 3.5E-59 | IPR015943 |
| SMART | SM00320 | WD40_4 | 166 | 204 | 0.74 | IPR001680 |
| SMART | SM00320 | WD40_4 | 298 | 337 | 5.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 340 | 380 | 0.061 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037430248.1 | SEC12-like protein 2 [Triticum dicoccoides] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A3B6IQT6 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG025860.