Basic Information
Locus ID:
gene:TRIDC4BG025040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 234704880 | 234710506 | + | gene:TRIDC4BG025040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 25,452.83 Da | 70.95 | 44.42 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 169 | 210 | 5.0E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 156 | 213 | 7.3E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 215 | 4.1E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 170 | 210 | 2.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 170 | 210 | 11.943417 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 124 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02290.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044363724.1 | E3 ubiquitin-protein ligase At3g02290-like isoform X1 [Triticum aestivum] | 0 |
| Q8LE94 | E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6U507 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG025040.