Basic Information
Locus ID:
gene:TRIDC4BG024690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine-rich repeats, outliers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 225607457 | 225644576 | - | gene:TRIDC4BG024690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 50,831.61 Da | 48.91 | 110.04 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 10 | 43 | 2.8E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 150 | 386 | 2.67E-34 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 43 | 2.22E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 309 | 468 | 8.7E-32 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 48 | 1.9E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 308 | 3.2E-31 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 422 | 447 | 5.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 396 | 421 | 0.11 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 370 | 395 | 76.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 293 | 317 | 360.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 215 | 240 | 20.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 190 | 214 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 242 | 267 | 41.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 268 | 292 | 35.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 344 | 369 | 4.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 318 | 343 | 0.072 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 164 | 189 | 0.0047 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037430194.1 | F-box/LRR-repeat protein 4-like isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A453HWB6 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG024690.