Basic Information
Locus ID:
gene:TRIDC4BG022390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 186048983 | 186049504 | - | gene:TRIDC4BG022390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 19,261.94 Da | 72.61 | 85.61 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 97 | 141 | 3.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 81 | 155 | 6.13E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 49 | 147 | 1.5E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 98 | 140 | 6.6E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 98 | 141 | 12.710573 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 73 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14320.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_048570394.1 | E3 ubiquitin-protein ligase Os04g0590900-like [Triticum urartu] | 0 |
| Q9LUL6 | Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6IPT7 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG022390.