Basic Information
Locus ID:
gene:TRIDC4BG021560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 178454741 | 178457954 | - | gene:TRIDC4BG021560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 82,693.44 Da | 35.45 | 98.80 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 505 | 772 | 5.76674E-97 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 53 | 93 | 4.3E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 170 | 228 | 1.1E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 503 | 769 | 1.7E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 503 | 773 | 5.88E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 370 | 9.52E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 505 | 576 | 2.0E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 165 | 240 | 1.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 371 | 4.6E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 784 | 4.4E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 164 | 5.8E-24 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 772 | 35.029011 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 170 | 183 | 4.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 283 | 296 | 4.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51740.1 | inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. | 0 |
| RefSeq | XP_037430010.1 | probable leucine-rich repeat receptor-like protein kinase IMK3 [Triticum dicoccoides] | 0 |
| C0LGP9 | Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IPL4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG021560.