Basic Information
Locus ID:
gene:TRIDC4BG021310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 177150388 | 177152903 | + | gene:TRIDC4BG021310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 91,955.59 Da | 39.73 | 81.03 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 56 | 166 | 1.14638E-17 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 350 | 428 | 6.96491E-14 | - |
| CDD | cd14066 | STKc_IRAK | 553 | 828 | 6.60637E-94 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 269 | 331 | 7.9E-8 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 550 | 826 | 5.4E-55 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 89 | 179 | 2.8E-15 | IPR001480 |
| Pfam | PF00024 | PAN domain | 358 | 408 | 5.3E-5 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 75 | 223 | 1.44E-18 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 530 | 828 | 2.29E-72 | IPR011009 |
| Gene3D | G3DSA:3.50.4.10 | Hepatocyte Growth Factor | 362 | 417 | 1.3E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 622 | 838 | 4.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 519 | 621 | 1.0E-29 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 37 | 165 | 1.7E-13 | IPR036426 |
| SMART | SM00108 | blect_4 | 47 | 166 | 4.1E-17 | IPR001480 |
| SMART | SM00220 | serkin_6 | 547 | 829 | 2.0E-35 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 10 | 837 | 1.2E-206 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 31 | 164 | 10.381886 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 547 | 829 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 669 | 681 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 553 | 575 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_037429946.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453HQJ5 | Receptor-like serine/threonine-protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG021310.