Basic Information
Locus ID:
gene:TRIDC4BG020540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK17
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 167593967 | 167596940 | - | gene:TRIDC4BG020540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 58,351.24 Da | 41.99 | 85.53 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 97 | 354 | 2.15809E-126 | - |
| CDD | cd00051 | EFh | 478 | 521 | 6.20349E-11 | IPR002048 |
| CDD | cd00051 | EFh | 403 | 462 | 2.32869E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 403 | 463 | 1.1E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 97 | 355 | 9.4E-72 | IPR000719 |
| Pfam | PF13405 | EF-hand domain | 477 | 501 | 7.1E-7 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 395 | 521 | 1.0E-39 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 95 | 363 | 1.23E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 363 | 6.4E-55 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 396 | 464 | 7.5E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 182 | 3.7E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 373 | 521 | 7.5E-50 | - |
| SMART | SM00054 | efh_1 | 438 | 466 | 1.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 474 | 502 | 0.011 | IPR002048 |
| SMART | SM00054 | efh_1 | 402 | 430 | 3.1E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 97 | 355 | 1.5E-92 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 398 | 433 | 15.127104 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 14.569197 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 355 | 46.307945 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 12.170192 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 130 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 411 | 423 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 79 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12180.1 | calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_048570114.1 | calcium-dependent protein kinase 25-like [Triticum urartu] | 0 |
| Q9FMP5 | Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453HQ90 | Calcium-dependent protein kinase 34 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG020540.