Basic Information
Locus ID:
gene:TRIDC4BG020080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 162499631 | 162506160 | - | gene:TRIDC4BG020080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 82,156.90 Da | 53.73 | 76.69 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 92 | 193 | 2.50161E-10 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 461 | 707 | 1.51052E-127 | - |
| Pfam | PF00989 | PAS fold | 84 | 189 | 2.2E-10 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 455 | 707 | 1.2E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 419 | 707 | 9.85E-85 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 88 | 189 | 6.46E-19 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 93 | 195 | 6.2E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 448 | 532 | 9.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 533 | 735 | 2.4E-63 | - |
| SMART | SM00091 | pas_2 | 83 | 150 | 5.0E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 455 | 715 | 6.4E-62 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 85 | 189 | 6.2E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 81 | 152 | 14.577922 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 455 | 710 | 44.936947 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 574 | 586 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 615 | 625 | 7.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 678 | 700 | 7.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 634 | 656 | 7.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 568 | 586 | 7.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 529 | 542 | 7.7E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 291 | - | - |
| Coils | Coil | Coil | 700 | 720 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_037429887.1 | probable serine/threonine-protein kinase SIS8 isoform X1 [Triticum dicoccoides] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IQT5 | PAS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG020080.