Basic Information
Locus ID:
gene:TRIDC4BG018800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 139466172 | 139466617 | + | gene:TRIDC4BG018800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 6,149.94 Da | 26.27 | 70.86 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 2 | 42 | 7.6E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1 | 48 | 5.3E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 52 | 9.5E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 1 | 41 | 0.0023 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 2 | 42 | 10.217316 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01880.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037421547.1 | RING-H2 finger protein ATL74-like [Triticum dicoccoides] | 0 |
| Q9LZV8 | RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1 | 0 | |
| TrEMBL | M7ZF88 | RING-H2 finger protein ATL72 OS=Triticum urartu OX=4572 GN=TRIUR3_13898 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG018800.