Basic Information
Locus ID:
gene:TRIDC4BG017070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 119468617 | 119475036 | + | gene:TRIDC4BG017070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 111,591.57 Da | 40.86 | 106.13 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 703 | 1000 | 5.2E-40 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 391 | 451 | 5.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 458 | 498 | 2.3E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 368 | 390 | 1.8 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 123 | 161 | 1.9E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 1.2E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 68 | 359 | 2.04E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 1002 | 1.75E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 368 | 622 | 4.59E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 682 | 783 | 3.3E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 1012 | 7.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 165 | 2.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 166 | 329 | 7.9E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 630 | 4.3E-89 | IPR032675 |
| SMART | SM00220 | serkin_6 | 702 | 1012 | 5.8E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 462 | 486 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 461 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 311 | 334 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 581 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 214 | 237 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 582 | 607 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 390 | 414 | 140.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 123 | 145 | 7.288416 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 1012 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 708 | 731 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037429702.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IQ51 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG017070.