Basic Information
Locus ID:
gene:TRIDC4BG016420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 112258952 | 112261329 | + | gene:TRIDC4BG016420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 77,299.44 Da | 35.91 | 82.10 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 375 | 645 | 4.10965E-88 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 36 | 272 | 1.07777E-72 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 371 | 641 | 2.3E-44 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 35 | 275 | 3.3E-61 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 277 | 1.26E-55 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 353 | 680 | 1.04E-75 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 32 | 279 | 1.2E-61 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 653 | 6.0E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 446 | 4.5E-31 | - |
| SMART | SM00220 | serkin_6 | 369 | 644 | 1.1E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 655 | 36.654423 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 398 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 157 | 163 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 715 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037429658.1 | L-type lectin-domain containing receptor kinase IX.1-like [Triticum dicoccoides] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6INH7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG016420.