Basic Information
Locus ID:
gene:TRIDC4BG015440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 102406279 | 102409582 | + | gene:TRIDC4BG015440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 90,186.89 Da | 53.99 | 66.15 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 372 | 404 | 6.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 668 | 690 | 0.083 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 519 | 555 | 1.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 476 | 513 | 6.5E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 366 | 692 | 8.98E-57 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 356 | 702 | 6.1E-62 | IPR015943 |
| SMART | SM00320 | WD40_4 | 650 | 691 | 0.0097 | IPR001680 |
| SMART | SM00320 | WD40_4 | 609 | 649 | 3.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 366 | 405 | 5.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 516 | 555 | 1.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 474 | 513 | 2.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 557 | 596 | 7.5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 481 | 522 | 16.623981 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 522 | 556 | 10.284687 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 481 | 516 | 13.052855 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 373 | 406 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 373 | 406 | 12.103769 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 522 | 556 | 12.346452 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 500 | 514 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 542 | 556 | 1.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 500 | 514 | 1.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 392 | 406 | 1.8E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037427260.1 | WD repeat-containing protein 44-like [Triticum dicoccoides] | 0 |
| Q5JSH3 | WD repeat-containing protein 44 OS=Homo sapiens OX=9606 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IN91 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG015440.