Basic Information
Locus ID:
gene:TRIDC4BG015320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ICP0-binding domain of Ubiquitin-specific protease 7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 101778515 | 101787679 | - | gene:TRIDC4BG015320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 89,511.92 Da | 54.81 | 91.08 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 709 | 750 | 9.6964E-22 | - |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 103 | 263 | 3.0E-38 | IPR024729 |
| Pfam | PF04564 | U-box domain | 706 | 774 | 2.5E-16 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 451 | 689 | 2.5E-27 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 704 | 773 | 3.97E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 424 | 703 | 4.99E-49 | IPR011009 |
| SUPERFAMILY | SSF57997 | Tropomyosin | 297 | 484 | 3.6E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 419 | 509 | 1.8E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 704 | 2.4E-35 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 152 | 264 | 2.3E-36 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 705 | 777 | 3.2E-25 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 708 | 771 | 1.1E-23 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 441 | 697 | 24.400244 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 704 | 778 | 32.651245 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 394 | 421 | - | - |
| Coils | Coil | Coil | 317 | 386 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037429582.1 | U-box domain-containing protein 57-like isoform X1 [Triticum dicoccoides] | 0 |
| Q0DR28 | U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB57 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IQP9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG015320.