Basic Information
Locus ID:
gene:TRIDC4BG015170
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 99591619 | 99608067 | - | gene:TRIDC4BG015170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 52,969.39 Da | 50.23 | 72.79 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 68 | 106 | 2.3E-7 | IPR001810 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 162 | 479 | 1.14E-31 | IPR036322 |
| SUPERFAMILY | SSF81383 | F-box domain | 66 | 122 | 3.53E-11 | IPR036047 |
| Gene3D | G3DSA:2.130.10.10 | - | 138 | 239 | 2.7E-5 | IPR015943 |
| Gene3D | G3DSA:1.20.1280.50 | - | 63 | 102 | 4.8E-8 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 240 | 481 | 6.5E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 263 | 301 | 4.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 348 | 388 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 440 | 478 | 280.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 142 | 179 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 304 | 345 | 0.5 | IPR001680 |
| SMART | SM00256 | fbox_2 | 65 | 106 | 0.0051 | IPR001810 |
| SMART | SM00320 | WD40_4 | 213 | 260 | 320.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 434 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52030.2 | F-box family protein with WD40/YVTN repeat doamin. | 0 |
| RefSeq | XP_037429573.1 | F-box/WD-40 repeat-containing protein At3g52030-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9SV01 | F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 GN=At3g52030 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6IPP9 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG015170.