Basic Information
Locus ID:
gene:TRIDC4BG014580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 94595899 | 94603794 | + | gene:TRIDC4BG014580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 62,473.38 Da | 45.60 | 72.42 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 329 | 354 | 0.0045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 283 | 312 | 3.7E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 149 | 528 | 6.05E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 538 | 4.7E-90 | IPR015943 |
| SMART | SM00320 | WD40_4 | 273 | 312 | 2.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 389 | 441 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 492 | 529 | 40.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 315 | 354 | 0.0071 | IPR001680 |
| SMART | SM00320 | WD40_4 | 202 | 244 | 1.7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 322 | 363 | 10.241105 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 287 | 321 | 9.004632 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 579 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37160.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_044980631.1 | dystrophia myotonica WD repeat-containing protein-like isoform X1 [Hordeum vulgare subsp. vulgare] | 0 |
| A1DMI8 | Probable catabolite repression protein creC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=creC PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6IN37 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG014580.