Basic Information
Locus ID:
gene:TRIDC4BG014520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 93884652 | 93890756 | + | gene:TRIDC4BG014520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 55,820.49 Da | 60.68 | 72.51 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 171 | 221 | 8.3E-8 | IPR001841 |
| Pfam | PF17979 | Cysteine rich domain with multizinc binding regions | 295 | 456 | 1.4E-44 | IPR040909 |
| SUPERFAMILY | SSF57850 | RING/U-box | 162 | 227 | 6.86E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 152 | 261 | 2.7E-16 | IPR013083 |
| Gene3D | G3DSA:3.30.40.140 | - | 262 | 352 | 2.2E-10 | - |
| SMART | SM00184 | ring_2 | 172 | 220 | 2.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 172 | 221 | 12.149959 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G47570.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037429504.1 | E3 ubiquitin-protein ligase CHFR-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A453HH99 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG014520.