Basic Information
Locus ID:
gene:TRIDC4BG014470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 93345834 | 93384595 | + | gene:TRIDC4BG014470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 166,213.45 Da | 48.03 | 89.58 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1142 | 1399 | 6.9E-72 | IPR000719 |
| Pfam | PF18052 | Rx N-terminal domain | 21 | 101 | 6.2E-13 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 189 | 430 | 2.0E-42 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 178 | 443 | 5.02E-51 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 492 | 883 | 6.63E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1127 | 1419 | 2.73E-86 | IPR011009 |
| Gene3D | G3DSA:3.40.50.300 | - | 176 | 329 | 5.8E-26 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 575 | 900 | 1.0E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 341 | 433 | 5.2E-11 | IPR042197 |
| Gene3D | G3DSA:1.20.5.4130 | - | 20 | 133 | 3.1E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1139 | 1433 | 5.4E-86 | - |
| SMART | SM00220 | serkin_6 | 1141 | 1399 | 2.4E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1141 | 1399 | 52.230091 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1147 | 1170 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1262 | 1274 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 679 | 695 | 5.8E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 206 | 221 | 5.8E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 376 | 390 | 5.8E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 279 | 293 | 5.8E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1064 | 1086 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1431 | 1487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1431 | 1481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1034 | 1054 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1034 | 1089 | - | - |
| Coils | Coil | Coil | 47 | 67 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66850.2 | - | 0 |
| RefSeq | XP_037429496.1 | disease resistance protein RGA5-like isoform X1 [Triticum dicoccoides] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453HHW0 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG014470.