Basic Information
Locus ID:
gene:TRIDC4BG013490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 84624146 | 84638505 | + | gene:TRIDC4BG013490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 99,823.63 Da | 48.41 | 86.59 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12657 | Transcription factor IIIC subunit delta N-term | 14 | 158 | 5.6E-12 | IPR024761 |
| Pfam | PF00400 | WD domain, G-beta repeat | 343 | 385 | 4.6E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 304 | 506 | 1.98E-17 | IPR036322 |
| SUPERFAMILY | SSF50952 | Soluble quinoprotein glucose dehydrogenase | 9 | 387 | 5.1E-5 | IPR011041 |
| Gene3D | G3DSA:2.130.10.10 | - | 281 | 548 | 3.2E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 453 | 492 | 0.016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 339 | 385 | 5.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 73 | 118 | 11.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 346 | 385 | 9.171722 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 201 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49400.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037429432.1 | uncharacterized protein LOC119295182 isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6ILC6 | TFIIIC_delta domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG013490.