Basic Information
Locus ID:
gene:TRIDC4BG011370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
UBX domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 66814818 | 66823044 | - | gene:TRIDC4BG011370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 56,538.81 Da | 59.21 | 71.62 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01767 | UBX | 315 | 387 | 4.03325E-14 | - |
| Pfam | PF00789 | UBX domain | 309 | 387 | 3.9E-15 | IPR001012 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 15 | 128 | 3.96E-15 | IPR036249 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 306 | 388 | 8.15E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 303 | 389 | 3.7E-19 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 20 | 128 | 2.2E-9 | - |
| SMART | SM00166 | ubx_3 | 305 | 388 | 3.7E-6 | IPR001012 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 308 | 386 | 17.204508 | IPR001012 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 313 | 387 | 8.633156 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 294 | - | - |
| Coils | Coil | Coil | 522 | 523 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43210.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037429284.1 | plant UBX domain-containing protein 11-like [Triticum dicoccoides] | 0 |
| Q9ZW74 | Plant UBX domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUX11 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6INU6 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG011370.