Basic Information
Locus ID:
gene:TRIDC4BG011100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 64858787 | 64860542 | - | gene:TRIDC4BG011100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 50,704.05 Da | 33.16 | 74.19 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 98 | 426 | 4.28026E-44 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 210 | 238 | 0.2 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 382 | 425 | 0.022 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 137 | 162 | 0.18 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 341 | 372 | 0.033 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 244 | 280 | 3.7E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 92 | 430 | 1.28E-51 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 293 | 477 | 1.2E-27 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 195 | 292 | 2.6E-19 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 83 | 179 | 1.7E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 125 | 163 | 0.52 | IPR001680 |
| SMART | SM00320 | WD40_4 | 87 | 124 | 4.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 336 | 373 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 200 | 239 | 0.002 | IPR001680 |
| SMART | SM00320 | WD40_4 | 378 | 426 | 3.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 292 | 331 | 0.0082 | IPR001680 |
| SMART | SM00320 | WD40_4 | 242 | 281 | 7.1E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 343 | 382 | 9.873505 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 249 | 280 | 12.346452 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 207 | 244 | 8.623787 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 207 | 248 | 11.510997 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 299 | 330 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 249 | 280 | 10.284687 | - |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 226 | 240 | 2.0E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 413 | 427 | 2.0E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 268 | 282 | 2.0E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 65 | - | - |
| Coils | Coil | Coil | 479 | 480 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037429270.1 | protein JINGUBANG-like [Triticum dicoccoides] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IPQ6 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG011100.