Basic Information
Locus ID:
gene:TRIDC4BG010920
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
BING4CT (NUC141) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 62723475 | 62729166 | + | gene:TRIDC4BG010920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 58,745.16 Da | 28.52 | 78.64 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 275 | 305 | 1.4E-5 | IPR001680 |
| Pfam | PF08149 | BING4CT (NUC141) domain | 352 | 430 | 1.9E-31 | IPR012952 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 115 | 375 | 9.77E-33 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 113 | 385 | 1.7E-25 | IPR015943 |
| SMART | SM00320 | WD40_4 | 224 | 263 | 340.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 308 | 342 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 266 | 305 | 2.7E-7 | IPR001680 |
| SMART | SM01033 | BING4CT_2 | 351 | 431 | 2.0E-46 | IPR012952 |
| SMART | SM00320 | WD40_4 | 144 | 181 | 190.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 273 | 307 | 10.759232 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 273 | 314 | 14.117617 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 292 | 306 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 522 | - | - |
| Coils | Coil | Coil | 441 | 468 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10530.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037429257.1 | probable U3 small nucleolar RNA-associated protein 7 [Triticum dicoccoides] | 0 |
| Q9P4X3 | Probable U3 small nucleolar RNA-associated protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp7 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6INQ5 | BING4CT domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG010920.