Basic Information
Locus ID:
gene:TRIDC4BG010150
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 56180292 | 56185282 | + | gene:TRIDC4BG010150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 85,196.43 Da | 40.15 | 78.41 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 179 | 204 | 0.0039 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 11 | 637 | 6.43E-37 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 221 | 483 | 4.6E-13 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 140 | 217 | 9.2E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 509 | 680 | 5.4E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 139 | 4.4E-9 | IPR015943 |
| SMART | SM00320 | WD40_4 | 215 | 253 | 2.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 591 | 632 | 220.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 20 | 62 | 0.034 | IPR001680 |
| SMART | SM00320 | WD40_4 | 165 | 204 | 5.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 256 | 295 | 0.0047 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 172 | 204 | 10.70896 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 172 | 204 | 8.992876 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 28 | 63 | 8.904377 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 137 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G07410.1 | Transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037429198.1 | WD repeat-containing protein PCN-like [Triticum dicoccoides] | 0 |
| Q8RXU6 | WD repeat-containing protein PCN OS=Arabidopsis thaliana OX=3702 GN=PCN PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IM14 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG010150.