Basic Information
Locus ID:
gene:TRIDC4BG006070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 25516555 | 25520158 | - | gene:TRIDC4BG006070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 55,759.85 Da | 54.08 | 74.83 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 225 | 256 | 0.21 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 316 | 353 | 0.21 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 110 | 142 | 0.0012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 147 | 185 | 1.5E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 280 | 307 | 0.055 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 364 | 398 | 2.8E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 71 | 409 | 3.66E-56 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 45 | 192 | 3.9E-30 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 197 | 439 | 1.3E-27 | IPR015943 |
| SMART | SM00320 | WD40_4 | 358 | 398 | 3.9E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 103 | 142 | 1.2E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 216 | 256 | 4.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 145 | 185 | 9.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 43 | 87 | 75.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 269 | 308 | 0.65 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 354 | 1.8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 365 | 407 | 12.145943 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 152 | 187 | 10.258324 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 110 | 151 | 12.881143 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 223 | 265 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 152 | 187 | 12.313033 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 110 | 145 | 10.205597 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 365 | 398 | 10.07378 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 243 | 257 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 172 | 186 | 5.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 385 | 399 | 5.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 129 | 143 | 5.4E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 504 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27640.2 | - | 0 |
| RefSeq | XP_037428892.1 | denticleless protein homolog isoform X2 [Triticum dicoccoides] | 0 |
| Q5ZJW8 | Denticleless protein homolog OS=Gallus gallus OX=9031 GN=DTL PE=2 SV=1 | 0 | |
| TrEMBL | A0A453H567 | WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG006070.