Basic Information
Locus ID:
gene:TRIDC4BG005180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 22311446 | 22316395 | + | gene:TRIDC4BG005180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.76 | 74,693.42 Da | 47.00 | 76.65 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 347 | 430 | 4.2251E-23 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 507 | 654 | 1.8E-34 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 220 | 329 | 7.2E-31 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 351 | 416 | 7.2E-21 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 486 | 669 | 9.43E-56 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 151 | 227 | 2.56E-6 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 579 | 6.2E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 580 | 669 | 9.7E-25 | - |
| SMART | SM00473 | ntp_6 | 351 | 429 | 2.9E-8 | IPR003609 |
| SMART | SM00220 | serkin_6 | 503 | 663 | 2.9E-9 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 351 | 430 | 10.186289 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 503 | 669 | 30.039709 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 509 | 532 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 150 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037427674.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453H3Z4 | Receptor-like serine/threonine-protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG005180.