Basic Information
Locus ID:
gene:TRIDC4BG004990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 21460332 | 21463858 | - | gene:TRIDC4BG004990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 64,128.38 Da | 40.89 | 79.32 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 101 | 360 | 2.50862E-121 | - |
| CDD | cd00051 | EFh | 409 | 468 | 7.21748E-17 | IPR002048 |
| CDD | cd00051 | EFh | 480 | 542 | 1.25839E-16 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 479 | 542 | 2.6E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 102 | 361 | 5.0E-68 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 407 | 469 | 5.6E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 385 | 554 | 9.16E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 98 | 369 | 3.24E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 104 | 188 | 2.5E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 369 | 1.4E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 370 | 544 | 2.2E-53 | - |
| SMART | SM00054 | efh_1 | 516 | 544 | 7.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 408 | 436 | 3.4E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 102 | 361 | 3.1E-92 | IPR000719 |
| SMART | SM00054 | efh_1 | 480 | 508 | 0.01 | IPR002048 |
| SMART | SM00054 | efh_1 | 444 | 472 | 0.035 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 439 | 15.322372 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 476 | 511 | 12.393354 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 102 | 361 | 47.410397 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 512 | 547 | 14.011288 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 10.747526 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 108 | 132 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 417 | 429 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 453 | 465 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 223 | 235 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 525 | 537 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 489 | 501 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 87 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_037428819.1 | calcium-dependent protein kinase 9-like [Triticum dicoccoides] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IM99 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG004990.