Basic Information
Locus ID:
gene:TRIDC4BG004610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UPL7
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 19641744 | 19650250 | - | gene:TRIDC4BG004610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 120,425.52 Da | 43.95 | 92.05 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 703 | 1069 | 6.50867E-139 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 758 | 1071 | 1.4E-91 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 701 | 1064 | 1.31E-106 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 705 | 943 | 8.7E-74 | - |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 829 | 908 | 8.7E-74 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 944 | 1071 | 8.8E-38 | - |
| SMART | SM00119 | hect_3 | 717 | 1071 | 2.5E-114 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 727 | 1071 | 83.430626 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 471 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53090.1 | ubiquitin-protein ligase 7. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_037428785.1 | E3 ubiquitin-protein ligase UPL7-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9SCQ2 | E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana OX=3702 GN=UPL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6IJI7 | HECT-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG004610.