Basic Information
Locus ID:
gene:TRIDC4BG004470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 18696487 | 18766431 | + | gene:TRIDC4BG004470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 18,882.21 Da | 82.91 | 68.13 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 24 | 122 | 7.60136E-36 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 24 | 159 | 2.5E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 8 | 143 | 1.3E-39 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 20 | 166 | 1.4E-47 | IPR016135 |
| SMART | SM00212 | ubc_7 | 23 | 166 | 1.0E-44 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 20 | 166 | 41.381912 | IPR000608 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42990.1 | ubiquitin-conjugating enzyme 18. | 0 |
| RefSeq | XP_037428773.1 | probable ubiquitin-conjugating enzyme E2 18 [Triticum dicoccoides] | 0 |
| Q9FMM0 | Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana OX=3702 GN=UBC18 PE=2 SV=1 | 0 | |
| TrEMBL | W5ETB0 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG004470.