Basic Information
Locus ID:
gene:TRIDC4BG003310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 13063896 | 13067432 | + | gene:TRIDC4BG003310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 59,121.09 Da | 42.26 | 99.96 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 36 | 193 | 1.41472E-58 | - |
| Pfam | PF00651 | BTB/POZ domain | 55 | 142 | 2.2E-6 | IPR000210 |
| Pfam | PF12313 | NPR1/NIM1 like defence protein C terminal | 378 | 512 | 3.3E-47 | IPR021094 |
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 230 | 275 | 4.4E-8 | IPR024228 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 277 | 364 | 5.8E-7 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 273 | 380 | 2.02E-15 | IPR036770 |
| SUPERFAMILY | SSF54695 | POZ domain | 38 | 191 | 2.67E-8 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 22 | 225 | 1.6E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 257 | 414 | 1.1E-16 | IPR036770 |
| SMART | SM00248 | ANK_2a | 336 | 365 | 0.018 | IPR002110 |
| SMART | SM00248 | ANK_2a | 298 | 332 | 370.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 336 | 368 | 11.22037 | IPR002110 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 56 | 143 | 13.715211 | IPR000210 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 336 | 363 | 10.630358 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45110.2 | - | 0 |
| RefSeq | XP_037428698.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR3-like [Triticum dicoccoides] | 0 |
| Q75HA6 | BTB/POZ domain and ankyrin repeat-containing protein NPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ILX3 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG003310.