Basic Information
Locus ID:
gene:TRIDC4BG001240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4B | 3872781 | 3940520 | + | gene:TRIDC4BG001240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 93,203.58 Da | 39.01 | 77.94 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 43 | 194 | 2.04581E-32 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 767 | 808 | 7.32325E-20 | - |
| Pfam | PF04564 | U-box domain | 764 | 833 | 3.6E-16 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 489 | 741 | 1.1E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 742 | 3.78E-69 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 757 | 832 | 4.33E-22 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 54 | 183 | 9.21E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 762 | 834 | 1.1E-23 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 761 | 6.2E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 559 | 1.8E-28 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 43 | 190 | 1.6E-11 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 766 | 829 | 7.8E-21 | IPR003613 |
| SMART | SM00220 | serkin_6 | 487 | 750 | 2.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 754 | 34.774601 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 762 | 835 | 30.537123 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 605 | 617 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 239 | - | - |
| Coils | Coil | Coil | 381 | 454 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037427593.1 | U-box domain-containing protein 33-like [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | M8CRU4 | U-box domain-containing protein 33 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4BG001240.