halophFGD

Basic Information

Locus ID: gene:TRIDC4AG072600

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: LRR receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
4A	726215443	726218875	+	gene:TRIDC4AG072600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.59	108,258.46 Da	34.27	105.70	0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13855	Leucine rich repeat	535	590	2.5E-8	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	29	65	8.5E-9	IPR013210
Pfam	PF00560	Leucine Rich Repeat	101	122	0.42	IPR001611
Pfam	PF00560	Leucine Rich Repeat	482	504	0.062	IPR001611
Pfam	PF13855	Leucine rich repeat	147	206	2.5E-7	IPR001611
Pfam	PF00069	Protein kinase domain	703	959	7.7E-46	IPR000719
Pfam	PF13855	Leucine rich repeat	220	278	1.3E-6	IPR001611
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	689	960	6.61E-74	IPR011009
SUPERFAMILY	SSF52058	L domain-like	56	395	4.42E-60	-
SUPERFAMILY	SSF52058	L domain-like	339	601	9.35E-52	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	659	774	5.9E-29	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	28	187	6.0E-38	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	188	285	4.0E-29	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	775	978	2.1E-51	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	286	626	2.4E-95	IPR032675
SMART	SM00369	LRR_typ_2	480	504	62.0	IPR003591
SMART	SM00369	LRR_typ_2	241	263	30.0	IPR003591
SMART	SM00369	LRR_typ_2	193	217	24.0	IPR003591
SMART	SM00365	LRR_sd22_2	265	288	770.0	-
SMART	SM00365	LRR_sd22_2	98	127	310.0	-
SMART	SM00365	LRR_sd22_2	480	503	27.0	-
SMART	SM00365	LRR_sd22_2	193	208	510.0	-
SMART	SM00365	LRR_sd22_2	289	315	170.0	-
SMART	SM00365	LRR_sd22_2	217	243	350.0	-
SMART	SM00369	LRR_typ_2	432	456	98.0	IPR003591
SMART	SM00369	LRR_typ_2	553	577	42.0	IPR003591
SMART	SM00369	LRR_typ_2	265	289	8.5	IPR003591
SMART	SM00369	LRR_typ_2	98	122	9.3	IPR003591
ProSiteProfiles	PS51450	Leucine-rich repeat profile.	482	505	7.511737	IPR001611
ProSiteProfiles	PS50011	Protein kinase domain profile.	701	979	38.901726	IPR000719
ProSitePatterns	PS00109	Tyrosine protein kinases specific active-site signature.	820	832	-	IPR008266
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	707	730	-	IPR017441
PRINTS	PR00019	Leucine-rich repeat signature	483	496	1.6E-5	-
PRINTS	PR00019	Leucine-rich repeat signature	553	566	1.6E-5	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G08850.1	Leucine-rich repeat receptor-like protein kinase family protein.
RefSeq	XP_037423925.1	MDIS1-interacting receptor like kinase 2-like [Triticum dicoccoides]
Swiss-Prot	Q8VZG8	MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3
TrEMBL	A0A3B6THM4	Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4AG072600.