halophFGD

Basic Information

Locus ID: gene:TRIDC4AG071760

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: WD domain, G-beta repeat

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
4A	724144329	724150821	+	gene:TRIDC4AG071760

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.25	87,418.72 Da	31.52	89.01	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00400	WD domain, G-beta repeat	559	595	0.066	IPR001680
Pfam	PF00400	WD domain, G-beta repeat	456	485	0.028	IPR001680
SUPERFAMILY	SSF50978	WD40 repeat-like	452	755	1.81E-38	IPR036322
Gene3D	G3DSA:2.130.10.10	-	454	773	9.2E-51	IPR015943
Gene3D	G3DSA:1.20.930.20	-	21	106	2.5E-5	IPR036537
SMART	SM00320	WD40_4	606	643	0.39	IPR001680
SMART	SM00320	WD40_4	689	728	0.31	IPR001680
SMART	SM00320	WD40_4	446	485	1.7	IPR001680
SMART	SM00320	WD40_4	553	595	0.095	IPR001680
SMART	SM00320	WD40_4	500	548	8.1	IPR001680
MobiDBLite	mobidb-lite	consensus disorder prediction	192	220	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	183	229	-	-

Gene Ontology

Biological Process:

GO:0007166 (cell surface receptor signaling pathway)

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_044334333.1	uncharacterized protein LOC123054597 isoform X2 [Triticum aestivum]	0
TrEMBL	A0A453CZ64	WD_REPEATS_REGION domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4AG071760.