Basic Information
Locus ID:
gene:TRIDC4AG071520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 723648151 | 723665835 | + | gene:TRIDC4AG071520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 249,129.02 Da | 47.88 | 94.63 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 61 | 145 | 3.5E-9 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 232 | 475 | 3.9E-33 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 1215 | 1457 | 7.6E-41 | IPR002182 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2052 | 2182 | 1.9E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2053 | 2180 | 4.78E-25 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1195 | 1470 | 1.5E-51 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 555 | 939 | 5.27E-18 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1535 | 1895 | 6.23E-12 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 218 | 490 | 2.79E-50 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 601 | 961 | 6.3E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1561 | 1905 | 7.8E-7 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 216 | 379 | 4.5E-26 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 1368 | 1454 | 1.2E-7 | IPR042197 |
| Gene3D | G3DSA:1.10.8.430 | - | 388 | 474 | 1.4E-7 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 1196 | 1359 | 1.7E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 1455 | 1547 | 8.4E-10 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 1049 | 1146 | 4.2E-7 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 60 | 175 | 2.1E-12 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 475 | 568 | 9.6E-12 | IPR036388 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2046 | 2185 | 3.7E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 2004 | 2185 | 14.082424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 2147 | 2159 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 326 | 340 | 7.3E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 423 | 437 | 7.3E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 687 | 703 | 7.3E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 253 | 268 | 7.3E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 998 | 1036 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46710.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_037423919.1 | uncharacterized protein LOC119288399 [Triticum dicoccoides] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A452ZSL0 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG071520.