Basic Information
Locus ID:
gene:TRIDC4AG070750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 720148902 | 720153260 | + | gene:TRIDC4AG070750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 39,268.35 Da | 43.66 | 77.91 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 39 | 79 | 1.5E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 7 | 315 | 2.33E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 90 | 353 | 2.6E-15 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 89 | 4.0E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 82 | 122 | 5.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 125 | 166 | 0.002 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 327 | 330.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 38 | 79 | 2.0E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 45 | 88 | 11.109979 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 45 | 82 | 8.887423 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 66 | 80 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47790.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037423966.1 | WD repeat-containing protein GTS1-like [Triticum dicoccoides] | 0 |
| Q944S2 | WD repeat-containing protein GTS1 OS=Arabidopsis thaliana OX=3702 GN=GTS1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RA27 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG070750.