HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC4AG070370
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Protein kinase domain
Maps and Mapping Data
Chromosome Start End Strand ID
4A 718735187 718741165 + gene:TRIDC4AG070370
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.05 100,106.52 Da 36.09 95.06 -0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 489 765 1.4E-50 IPR000719
Pfam PF00069 Protein kinase domain 179 455 8.8E-41 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 162 459 8.2E-61 IPR011009
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 472 767 2.16E-69 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 465 562 3.3E-23 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 580 786 2.6E-52 -
Gene3D G3DSA:3.30.70.100 - 88 161 1.7E-9 -
Gene3D G3DSA:3.30.70.100 - 1 73 4.6E-17 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 270 464 1.3E-43 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 162 250 1.3E-22 -
SMART SM00220 serkin_6 488 768 5.0E-37 IPR000719
SMART SM00220 serkin_6 178 459 1.6E-13 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 488 772 36.2304 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 178 459 31.128027 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 494 517 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 184 207 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 622 634 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G00960.1 Protein kinase superfamily protein. 0
RefSeq XP_037423848.1 tyrosine-protein kinase JAK2-like isoform X1 [Triticum dicoccoides] 0
Swiss-Prot O23082 Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 0
TrEMBL Q8LKP0 Barley stem rust resistance protein OS=Hordeum vulgare subsp. spontaneum OX=77009 GN=Rpg1 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC4AG070370.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.