Basic Information
Locus ID:
gene:TRIDC4AG070050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 717570718 | 717574209 | - | gene:TRIDC4AG070050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 113,794.46 Da | 34.69 | 101.25 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 167 | 189 | 0.42 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 439 | 460 | 0.6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 732 | 965 | 7.9E-39 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 366 | 388 | 1.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 585 | 606 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 88 | 4.0E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 391 | 645 | 3.74E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 712 | 1022 | 4.92E-67 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 79 | 388 | 1.64E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 811 | 4.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 812 | 1039 | 2.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 662 | 1.0E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 334 | 7.5E-71 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 485 | 509 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 165 | 188 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 213 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 10.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 728 | 1025 | 1.8E-20 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 364 | 387 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 534 | 558 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 437 | 461 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 582 | 605 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 728 | 1035 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 734 | 759 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 862 | 874 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037425033.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453QBR2 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG070050.