Basic Information
Locus ID:
gene:TRIDC4AG068980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 4A | 713384869 | 713396026 | - | gene:TRIDC4AG068980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 146,457.61 Da | 41.33 | 85.80 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 40 | 293 | 2.3E-47 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 627 | 660 | 0.0041 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 670 | 703 | 0.23 | IPR001680 |
| SUPERFAMILY | SSF49354 | PapD-like | 309 | 434 | 2.35E-8 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 300 | 2.43E-68 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 465 | 588 | 2.01E-16 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 589 | 1170 | 7.33E-40 | IPR036322 |
| SUPERFAMILY | SSF49354 | PapD-like | 791 | 920 | 1.18E-8 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 310 | 439 | 8.4E-14 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 309 | 1.0E-46 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 462 | 728 | 9.9E-58 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 109 | 2.8E-22 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 932 | 1211 | 3.5E-43 | IPR015943 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 789 | 922 | 5.2E-16 | IPR013783 |
| SMART | SM00320 | WD40_4 | 620 | 661 | 4.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 926 | 964 | 7.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1093 | 1129 | 7.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1132 | 1170 | 0.032 | IPR001680 |
| SMART | SM00320 | WD40_4 | 579 | 617 | 71.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 494 | 534 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 664 | 703 | 0.0011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1053 | 1090 | 3.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 537 | 575 | 3.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 448 | 491 | 140.0 | IPR001680 |
| SMART | SM00220 | serkin_6 | 38 | 318 | 1.7E-39 | IPR000719 |
| SMART | SM00320 | WD40_4 | 972 | 1007 | 240.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 627 | 670 | 10.876051 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 671 | 703 | 9.739832 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 627 | 660 | 8.940149 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 793 | 920 | 9.860189 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 301 | 36.922966 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 311 | 435 | 10.319178 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 65 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1219 | 1288 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_037423781.1 | uncharacterized protein LOC119288251 isoform X3 [Triticum dicoccoides] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7VCS2 | Coatomer subunit beta'-2 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC4AG068980.